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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11990446 chr8:8825795 C/G WRN chr8:30891317-31031285:+ 0.68 7.52 3.82E-13 Box Plot
BLCA rs11990446 chr8:8825795 C/G XPO7 chr8:21777182-21864096:+ 0.86 8.3 1.85E-15 Box Plot
BLCA rs11990893 chr8:398980 C/G BIN3 chr8:22477931-22526661:- -0.38 -6 4.45E-9 Box Plot
BLCA rs11992267 chr8:24922539 C/T BIN3 chr8:22477931-22526661:- -0.61 -6.77 4.74E-11 Box Plot
BLCA rs11992267 chr8:24922539 C/T CCDC25 chr8:27590828-27630170:- -0.67 -6.54 1.97E-10 Box Plot
BLCA rs11992267 chr8:24922539 C/T CHMP7 chr8:23101150-23119513:+ -0.7 -7.36 1.15E-12 Box Plot
BLCA rs11992267 chr8:24922539 C/T CNOT7 chr8:17082473-17104387:- -0.71 -7.22 2.75E-12 Box Plot
BLCA rs11992267 chr8:24922539 C/T DCTN6 chr8:30013813-30041156:+ -0.61 -6.09 2.74E-9 Box Plot
BLCA rs11992267 chr8:24922539 C/T ELP3 chr8:27947190-28048673:+ -0.78 -7.65 1.59E-13 Box Plot
BLCA rs11992267 chr8:24922539 C/T ENTPD4 chr8:23243296-23315208:- -0.53 -6.23 1.24E-9 Box Plot
BLCA rs11992267 chr8:24922539 C/T INTS10 chr8:19674651-19709594:+ -0.65 -6.67 9.1E-11 Box Plot
BLCA rs11992267 chr8:24922539 C/T INTS9 chr8:28625178-28747759:- -0.73 -7.16 4.29E-12 Box Plot
BLCA rs11992267 chr8:24922539 C/T KIAA1967 chr8:22462257-22477981:+ -0.83 -8.52 3.79E-16 Box Plot
BLCA rs11992267 chr8:24922539 C/T POLR3D chr8:22102617-22112113:+ -0.58 -6.11 2.44E-9 Box Plot
BLCA rs11992267 chr8:24922539 C/T PPP2R2A chr8:26149007-26230196:+ -0.63 -6.67 9.01E-11 Box Plot